1. geneplast::gpdata.gs
    A pre-processed dataset for the geneplast package.
    json| rda| rds
  2. geneplast::ppi.gs
    A pre-processed igraph object for the geneplast package.
    rda| rds
    igraph
  3. PathwaySpace::CGC_20211118
    COSMIC-CGC genes mapped to PathwaySpace images.
    csv| xlsx| json| ndjson| rda| rds
    data.frame|723 x 3
  4. PathwaySpace::PCv12_pruned_igraph
    A pruned and laid out igraph object from Pathway Commons V12.
    rda| rds
    igraph
  5. PathwaySpace::gdist.toy
    A pruned and laid out igraph object from Pathway Commons V12.
    csv| json| rda| rds
    matrix|500 x 500
  6. PathwaySpace::gimage
    An image matrix.
    csv| json| rda| rds
    matrix|500 x
  7. PathwaySpace::gtoy1
    Toy 'igraph' objects.
    rda| rds
    igraph
  8. PathwaySpace::gtoy2
    Toy 'igraph' objects.
    rda| rds
    igraph
  9. PathwaySpace::hallmarks
    A list with Hallmark gene sets (v2023.1).
    json| rda| rds
    list
  10. RedeR::ER.limma
    Pre-processed dataset for RedeR case studies.
    csv| xlsx| json| ndjson| rda| rds
    data.frame|2900 x 12
  11. RedeR::hs.inter
    Pre-processed igraph object for RedeR case studies.
    rda| rds
    igraph
  12. RGraphSpace::gtoy1
    Toy 'igraph' objects
    rda| rds
    igraph
  13. RGraphSpace::gtoy2
    Toy 'igraph' objects
    rda| rds
    igraph
  14. RTN::pksData
    Pre-processed datasets for the RTN package.
    csv| json| rda| rds
    list
  15. RTN::stni
    A pre-processed TNI for demonstration purposes only.
    rda| rds
    TNI
  16. RTN::tfsData
    Pre-processed datasets for the RTN package.
    csv| json| rda| rds
    list
  17. RTN::tnaData
    Pre-processed datasets for the RTN package.
    json| rda| rds
    list
  18. RTN::tniData
    Pre-processed datasets for the RTN package.
    json| rda| rds
    list