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  1. geneplast::ppi.gs
    A pre-processed igraph object for the geneplast package.
    rda| rds
    igraph
  2. PathwaySpace::CGC_20211118
    COSMIC-CGC genes mapped to PathwaySpace images
    csv| xlsx| json| ndjson| rda| rds
    data.frame|723 x 3
  3. PathwaySpace::gdist.toy
    A pruned and laid out igraph object from Pathway Commons V12
    csv| json| rda| rds
    matrix|500 x 0
  4. PathwaySpace::gimage
    An image matrix
    csv| json| rda| rds
    matrix|500 x 0
  5. PathwaySpace::hallmarks
    A list with Hallmark gene sets (v2023.1)
    json| rda| rds
    list
  6. PathwaySpace::PCv12_pruned_igraph
    A pruned and laid out igraph object from Pathway Commons V12
    rda| rds
    igraph
  7. RedeR::ER.limma
    Pre-processed dataset for RedeR case studies.
    csv| xlsx| json| ndjson| rda| rds
    data.frame|2900 x 12
  8. RedeR::hs.inter
    Pre-processed igraph object for RedeR case studies.
    rda| rds
    igraph
  9. RGraphSpace::gs_image_toy
    Toy 'GraphSpace' object
    rda| rds
    GraphSpace
  10. RGraphSpace::gtoy1
    Toy 'igraph' objects
    rda| rds
    igraph
  11. RGraphSpace::gtoy2
    Toy 'igraph' objects
    rda| rds
    igraph
  12. RTN::pksData
    Pre-processed datasets for the RTN package.
    csv| json| rda| rds
    list
  13. RTN::stni
    A pre-processed TNI for demonstration purposes only.
    rda| rds
    TNI
  14. RTN::tfsData
    Pre-processed datasets for the RTN package.
    csv| json| rda| rds
    list
  15. RTN::tnaData
    Pre-processed datasets for the RTN package.
    json| rda| rds
    list
  16. RTN::tniData
    Pre-processed datasets for the RTN package.
    json| rda| rds
    list
  17. TreeAndLeaf::phylo_species
    Species metadata from STRING-db v11
    csv| xlsx| json| ndjson| rda| rds
    data.frame|5090 x 4
  18. TreeAndLeaf::phylo_tree
    Species tree from STRING-db v11
    rda| rds
    phylo
  19. TreeAndLeaf::spdata
    Genome statistics for eukaryotes with complete genome sequence
    csv| xlsx| json| ndjson| rda| rds
    data.frame|507 x 5